eu_get_replicate_fastq_encffs¶
Given an ENCODE experiment identifier, Prints the FASTQ ENCFF identifiers for the specified replicate and technical replicates, or all replicates. Also prints the replicate numbers. For each FASTQ identifer, the following is printed to stdout:
$BioNum_$TechNum_$ReadNumt$encff
where variables are defined as:
$BioNum - the biological repliate number $TechNum - the technial replicate number $ReadNum - ‘1’ for a forwards reads FASTQ file, and ‘2’ for a reverse reads FASTQ file.
usage: eu_get_replicate_fastq_encffs.py [-h] [-m DCC_MODE] -e EXP_ID
[-b BIO_REP_NUM] [-t TECH_REP_NUM]
Named Arguments¶
-m, --dcc-mode |
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-e, --exp-id |
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-b, --bio-rep-num | |
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-t, --tech-rep-num | |
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